This document is intended to help you decide which paper(s) to quote when referring to a program. Also see the list of references. Note that all Gerard's programs print one or more references at start-up.
Item | Paper(s) to cite |
---|---|
COMA | Kleywegt, G.J. and Jones, T.A. (1999). Software for handling macromolecular envelopes. Acta Cryst D, accepted. |
DATAMAN | Kleywegt, G.J. and Jones, T.A. (1996). xdlMAPMAN and xdlDATAMAN - programs for reformatting, analysis and manipulation of biomacromolecular electron-density maps and reflection data sets. Acta Cryst D52, 826-828. |
DEJAVU | Kleywegt, G.J. and Jones, T.A. (1997). Detecting folding motifs and similarities in protein structures. Meth Enzymol 277, 525-545. |
DEJAVU | Kleywegt, G.J. and Jones, T.A. (1994). Halloween ... masks and bones. In "From First Map to Final Model", edited by S. Bailey, R. Hubbard and D. Waller. SERC Daresbury Laboratory, Warrington, pp. 59-66. |
ESSENS | Kleywegt, G.J. and Jones, T.A. (1997). Template convolution to enhance or detect structural features in macromolecular electron-density maps. Acta Cryst D53, 179-185. |
LSQMAN | Kleywegt, G.J. (1996). Use of non-crystallographic symmetry in protein structure refinement. Acta Cryst D52, 842-857. |
MAMA | Kleywegt, G.J. and Jones, T.A. (1994). Halloween ... masks and bones. In "From First Map to Final Model", edited by S. Bailey, R. Hubbard and D. Waller. SERC Daresbury Laboratory, Warrington, pp. 59-66. |
MAMA | Kleywegt, G.J. and Jones, T.A. (1999). Software for handling macromolecular envelopes. Acta Cryst D, accepted. |
MAPMAN | Kleywegt, G.J. and Jones, T.A. (1996). xdlMAPMAN and xdlDATAMAN - programs for reformatting, analysis and manipulation of biomacromolecular electron-density maps and reflection data sets. Acta Cryst D52, 826-828. |
MASKIT | Kleywegt, G.J. and Jones, T.A. (1999). Software for handling macromolecular envelopes. Acta Cryst D, accepted. |
MOLEMAN(2) | Kleywegt, G.J. (1997). Validation of protein models from C[alpha] coordinates alone. J Mol Biol 273, 371-376. |
O | Jones, T.A., Zou, J.Y., Cowan, S.W. and Kjeldgaard, M. (1991). Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Cryst A47, 110-119. |
OOPS | Kleywegt, G.J. and Jones, T.A. (1996). Efficient rebuilding of protein structures. Acta Cryst D52, 829-832. |
QDB | Kleywegt, G.J. (1996). Use of non-crystallographic symmetry in protein structure refinement. Acta Cryst D52, 842-857. |
RAVE | Jones, T.A. (1992). A, yaap, asap, @#*? A set of averaging programs. In "Molecular Replacement", edited by E.J. Dodson, S. Gover and W. Wolf. SERC Daresbury Laboratory, Warrington, pp. 91-105. |
RAVE | Kleywegt, G.J. and Jones, T.A. (1994). Halloween ... masks and bones. In "From First Map to Final Model", edited by S. Bailey, R. Hubbard and D. Waller. SERC Daresbury Laboratory, Warrington, pp. 59-66. |
RIGOR | Kleywegt, G.J. (1999). Recognition of spatial motifs in protein structures. J Mol Biol 285, 1887-1897. |
SBIN | Kleywegt, G.J. and Jones, T.A. (1998). Databases in protein crystallography. Acta Cryst D54, 1119-1131. |
SPASM | Kleywegt, G.J. (1999). Recognition of spatial motifs in protein structures. J Mol Biol 285, 1887-1897. |
VOIDOO | Kleywegt, G.J. and Jones, T.A. (1994). Detection, delineation, measurement and display of cavities in macromolecular structures. Acta Cryst D50, 178-185. |