EMBL/ESRF specific pages for Solve / Resolve
last modified
05-02-2008 13:37
Current version: version 2.12 of 14-Oct-2006
Template files for SAD/MAD phasing
| SAD | MAD |
Tips
- Since version 2.05 there is a new program called resolve_pattern that can be used to improve phases calculated by solve before running resolve.
- resolve is now able to automaticly estimate the percentage of solvent.
- There is also a new procedure to do iterative model building
using resolve and refmac5 (resolve_autobuild.csh).
So the new standard procedure is:
- run solve
- In difficult case try resolve_pattern.csh
- run resolve or resolve_autobuild.csh -
One can chain:
solve.com ; resolve_pattern.csh ; resolve_autobuild.csh
You can modified these script by copying them in your local directory:
(cp /opt/pxsoft/solve-2.06/scripts/resolve_*.csh .)
Known problems
-
On linux, there is a NFS bug that slows down solve and resolve processes when they are started on nice accounts. To run these programs much faster, one can create a temporary directory in /tmp, and start the programs from there. WARNING: Do not forget to copy back to your nice account this directory at the end of the run. Your file may be deleted in a short period.