Macromolecular Crystallography Staff Publications
last modified
09-09-2008 14:00
| Author | Title | Year | Journal/Proceedings | Reftype | DOI/URL |
|---|---|---|---|---|---|
| Williams, P., Coates, L., Mohammed, F., Gill, R., Erskine, P., Bourgeois, D., Wood, S. P., Anthony, C. & Cooper, J. B. | The 1.6 X-ray structure of the unusual c-type cytochrome, cytochrome cL, from the methylotrophic bacterium Methylobacterium extorquens | 2006 | J Mol Biol | article | URL |
| Vernede, X., Lavault, B., Ohana, J., Nurizzo, D., Joly, J., Jacquamet, L., Felisaz, F., Cipriani, F. & Bourgeois, D. | UV laser-excited fluorescence as a tool for the visualization of protein crystals mounted in loops | 2006 | Acta~Cryst.~D | article | URL |
| Timmins, J. & McSweeney, S. | XPB: An essential helicase involved in both transcription and repair of DNA | 2006 | Mol Cell | article | URL |
| Sundaramoorthy, R., Micossi, E., Alphey, M. S., Germain, V., Bryce, J. H., Smith, S. M., Leonard, G. A. & Hunter, W. N. | The crystal structure of a plant 3-ketoacyl-CoA thiolase reveals the potential for redox control of peroxisomal fatty acid beta-oxidation | 2006 | J Mol Biol | article | URL |
| Seybert, A., Singleton, M. R., Cook, N., Hall, D. R. & Wigley, D. B. | Communication between subunits within an archaeal clamp-loader complex | 2006 | EMBO J | article | URL |
| Sanchez, J. F., Lescar, J., Chazalet, V., Audfray, A., Gagnon, J., Alvarez, R., Breton, C., Imberty, A. & Mitchell, E. P. | Biochemical and structural analysis of Helix pomatia agglutinin. A hexameric lectin with a novel fold | 2006 | J Biol Chem | article | URL |
| Sabin, C., Mitchell, E. P., Pokorná, M., Gautier, C., Utille, J. P., Wimmerová, M. & Imberty, A. | Binding of different monosaccharides by lectin PA-IIL from Pseudomonas aeruginosa: thermodynamics data correlated with X-ray structures | 2006 | FEBS Lett | article | URL |
| Romão, C. V., Mitchell, E. P. & McSweeney, S. | The crystal structure of Deinococcus radiodurans Dps protein (DR2263) reveals the presence of a novel metal centre in the N terminus | 2006 | J Biol Inorg Chem | article | URL |
| Ricagno, S., Egloff, M. P., Ulferts, R., Coutard, B., Nurizzo, D., Campanacci, V., Cambillau, C., Ziebuhr, J. & Canard, B. | Crystal structure and mechanistic determinants of SARS coronavirus nonstructural protein 15 define an endoribonuclease family | 2006 | Proc Natl Acad Sci U S A | article | URL |
| Ravelli, R. B. & Garman, E. F. | Radiation damage in macromolecular cryocrystallography | 2006 | Curr Opin Struct Biol | article | URL |
| Pokorná, M., Cioci, G., Perret, S., Rebuffet, E., Kostlánová, N., Adam, J., Gilboa-Garber, N., Mitchell, E. P., Imberty, A. & Wimmerová, M. | Unusual entropy-driven affinity of Chromobacterium violaceum lectin CV-IIL toward fucose and mannose | 2006 | Biochemistry | article | URL |
| Nurizzo, D., Mairs, T., Guijarro, M., Rey, V., Meyer, J., Fajardo, P., Chavanne, J., Biasci, J. C., McSweeney, S. & Mitchell, E. | The ID23-1 structural biology beamline at the ESRF | 2006 | J Synchrotron Radiat | article | URL |
| Nicoll, A. J., Miller, D. J., Futterer, K., Ravelli, R. & Allemann, R. K. | Designed high affinity Cu2+-binding alpha-helical foldamer | 2006 | J Am Chem Soc | article | |
| Nanao, M. H. & Ravelli, R. B. | Phasing macromolecular structures with UV-induced structural changes | 2006 | Structure | article | URL |
| Muziol, T., Pineda-Molina, E., Ravelli, R., Zamborlini, A., Usami, Y., Gottlinger, H. & Weissenhorn, W. | Structural basis for budding by the ESCRT-III factor CHMP3 | 2006 | Dev Cell | article | |
| Moe, E., Leiros, I., Smals, A. O. & McSweeney, S. | The crystal structure of mismatch-specific uracil-DNA glycosylase (MUG) from Deinococcus radiodurans reveals a novel catalytic residue and broad substrate specificity | 2006 | J Biol Chem | article | URL |
| Leiros, H. K., Timmins, J., Ravelli, R. B. & McSweeney, S. M. | Is radiation damage dependent on the dose rate used during macromolecular crystallography data collection? | 2006 | Acta~Cryst.~D | article | URL |
| Legrand, P., Dumas, R., Seux, M., Rippert, P., Ravelli, R., Ferrer, J. L. & Matringe, M. | Biochemical characterization and crystal structure of Synechocystis arogenate dehydrogenase provide insights into catalytic reaction | 2006 | Structure | article | |
| Lübbert, D., Mikulik, P., Pernot, P., Helfen, L., Craven, S., S., D. & T., B. | X-ray microdiffraction imaging investigations of wing tilt in epitaxially overgrown GaN | 2006 | Phys. Stat. Sol. | article | |
| Kadlec, J., Guilligay, D., Ravelli, R. B. & Cusack, S. | Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1 | 2006 | RNA | article | URL |
| Imberty, A., Wimmerova, M., C., S. & Mitchell, E. | Structures and roles of Pseudomonas aeruginosa lectins | 2006 | inbook | ||
| Girard, E., Legrand, P., Roudenko, O., Roussier, L., Gourhant, P., Gibelin, J., Dalle, D., Ounsy, M., Thompson, A. W., Svensson, O., Cordier, M. O., Robin, S., Quiniou, R. & Steyer, J. P. | Instrumentation for synchrotron-radiation macromolecular crystallography | 2006 | Acta~Cryst.~D | article | URL |
| Flot, D., Gordon, E. J., Hall, D. R., Leonard, G. A., McCarthy, A., McCarthy, J., McSweeney, S., Mitchell, E., Nurizzo, D., Ravelli, R. G. & Shepard, W. | The care and nurture of undulator data sets | 2006 | Acta~Cryst.~D | article | URL |
| Ernst, H. A., Lo Leggio, L., Willemoës, M., Leonard, G., Blum, P. & Larsen, S. | Structure of the Sulfolobus solfataricus alpha-glucosidase: implications for domain conservation and substrate recognition in GH31 | 2006 | J Mol Biol | article | URL |
| Díaz-Moreno, I., Díaz-Quintana, A., Subías, G., Mairs, T., De la Rosa, M. A. & Díaz-Moreno, S. | Detecting transient protein-protein interactions by X-ray absorption spectroscopy: The cytochrome c6-photosystem I complex | 2006 | FEBS Lett | article | URL |
| Dian, C., Schauer, K., Kapp, U., McSweeney, S. M., Labigne, A. & Terradot, L. | Structural basis of the nickel response in Helicobacter pylori: crystal structures of HpNikR in Apo and nickel-bound states | 2006 | J Mol Biol | article | URL |
| Dennis, R. J., Micossi, E., McCarthy, J., Moe, E., Gordon, E. J., Kozielski-Stuhrmann, S., Leonard, G. A. & McSweeney, S. | Structure of the manganese superoxide dismutase from Deinococcus radiodurans in two crystal forms | 2006 | Acta Cryst. F | article | URL |
| Dautel, O. J., Wantz, G., Almairac, R., Flot, D., Hirsch, L., Lere-Porte, J. P., Parneix, J. P., Serein-Spirau, F., Vignau, L. & Moreau, J. J. | Nanostructuration of phenylenevinylenediimide-bridged silsesquioxane: from electroluminescent molecular J-aggregates to photoresponsive polymeric H-aggregates | 2006 | J Am Chem Soc | article | URL |
| Cipriani, F., Felisaz, F., Launer, L., Aksoy, J. S., Caserotto, H., Cusack, S., Dallery, M., di-Chiaro, F., Guijarro, M., Huet, J., Larsen, S., Lentini, M., McCarthy, J., McSweeney, S., Ravelli, R., Renier, M., Taffut, C., Thompson, A., Leonard, G. A. & Walsh, M. A. | Automation of sample mounting for macromolecular crystallography | 2006 | Acta~Cryst.~D | article | URL |
| Cioci, G., Mitchell, E. P., Chazalet, V., Debray, H., Oscarson, S., Lahmann, M., Gautier, C., Breton, C., Perez, S. & Imberty, A. | Beta-propeller crystal structure of Psathyrella velutina lectin: an integrin-like fungal protein interacting with monosaccharides and calcium | 2006 | J Mol Biol | article | URL |
| Buschiazzo, A., Goytia, M., Schaeffer, F., Degrave, W., Shepard, W., Grégoire, C., Chamond, N., Cosson, A., Berneman, A., Coatnoan, N., Alzari, P. M. & Minoprio, P. | Crystal structure, catalytic mechanism, and mitogenic properties of Trypanosoma cruzi proline racemase | 2006 | Proc Natl Acad Sci U S A | article | URL |
| Burghardt, A. J., Wang, Y., Elalieh, H., Thibault, X., Bikle, D., Peyrin, F. & Majumdar, S. | Evaluation of fetal bone structure and mineralization in IGF-I deficient mice using synchrotron radiation microtomography and Fourier transform infrared spectroscopy | 2006 | Bone | article | URL |
| Bourgeois, D., Vallone, B., Arcovito, A., Sciara, G., Schotte, F., Anfinrud, P. A. & Brunori, M. | Extended subnanosecond structural dynamics of myoglobin revealed by Laue crystallography | 2006 | Proc Natl Acad Sci U S A | article | URL |
| Beteva, A., Cipriani, F., Cusack, S., Delageniere, S., Gabadinho, J., Gordon, E. J., Guijarro, M., Hall, D. R., Larsen, S., Launer, L., Lavault, C. B., Leonard, G. A., Mairs, T., McCarthy, A., McCarthy, J., Meyer, J., Mitchell, E., Monaco, S., Nurizzo, D., Pernot, P., Pieritz, R., Ravelli, R. G., Rey, V., Shepard, W., Spruce, D., Stuart, D. I., Svensson, O., Theveneau, P., Thibault, X., Turkenburg, J., Walsh, M. & McSweeney, S. M. | High-throughput sample handling and data collection at synchrotrons: embedding the ESRF into the high-throughput gene-to-structure pipeline | 2006 | Acta~Cryst.~D | article | URL |
| Bellinzoni, M., Haouz, A., Graña, M., Munier-Lehmann, H., Shepard, W. & Alzari, P. M. | The crystal structure of Mycobacterium tuberculosis adenylate kinase in complex with two molecules of ADP and Mg2+ supports an associative mechanism for phosphoryl transfer | 2006 | Protein Sci | article | URL |
| Aragão, D., Marques, A. R., Frazão, C., Enguita, F. J., Carrondo, M. A., Fialho, A. M., Sá-Correia, I. & Mitchell, E. P. | Cloning, expression, purification, crystallization and preliminary structure determination of glucose-1-phosphate uridylyltransferase (UgpG) from Sphingomonas elodea ATCC 31461 bound to glucose-1-phosphate | 2006 | Acta Cryst. F | article | URL |
| Albertini, A. A., Wernimont, A. K., Muziol, T., Ravelli, R. B., Clapier, C. R., Schoehn, G., Weissenhorn, W. & Ruigrok, R. W. | Crystal structure of the rabies virus nucleoprotein-RNA complex | 2006 | Science | article | URL |
| Weik, M., Schreurs, A. M., Leiros, H. K., Zaccai, G., Ravelli, R. B. & Gros, P. | Supercooled liquid-like solvent in trypsin crystals: implications for crystal annealing and temperature-controlled X-ray radiation damage studies | 2005 | J Synchrotron Radiat | article | URL |
| Walker, D., Thomas, P., Jiang, Q., Pernot, P., Baruchel, J. & Ayguavives, T. | X-ray imaging investigation of periodically-electroded Rubidium Titanyl Arsenate, RbTiAsO4, under an applied electric field | 2005 | J. Phys. D: Appl. Phys. | article | |
| Timmins, J., Leiros, H. K., Leonard, G., Leiros, I. & McSweeney, S. | Crystal structure of maltooligosyltrehalose trehalohydrolase from Deinococcus radiodurans in complex with disaccharides | 2005 | J Mol Biol | article | URL |
| Terradot, L., Bayliss, R., Oomen, C., Leonard, G. A., Baron, C. & Waksman, G. | Structures of two core subunits of the bacterial type IV secretion system, VirB8 from Brucella suis and ComB10 from Helicobacter pylori | 2005 | Proc Natl Acad Sci U S A | article | URL |
| Roche, C., Kadlecíková, K., Veyron, A., Delair, P., Philouze, C., Greene, A. E., Flot, D. & Burghammer, M. | New asymmetric approach to natural pyrrolizidines: synthesis of (+)-amphorogynine A, (+)-amphorogynine D, and (+)-retronecine | 2005 | J Org Chem | article | URL |
| Ravelli, R. B., Nanao, M. H., Lovering, A., White, S. & McSweeney, S. | Phasing in the presence of radiation damage | 2005 | J Synchrotron Radiat | article | URL |
| Proctor, M. R., Taylor, E. J., Nurizzo, D., Turkenburg, J. P., Lloyd, R. M., Vardakou, M., Davies, G. J. & Gilbert, H. J. | Tailored catalysts for plant cell-wall degradation: redesigning the exo/endo preference of Cellvibrio japonicus arabinanase 43A | 2005 | Proc Natl Acad Sci U S A | article | URL |
| Perret, S., Sabin, C., Dumon, C., Pokorná, M., Gautier, C., Galanina, O., Ilia, S., Bovin, N., Nicaise, M., Desmadril, M., Gilboa-Garber, N., Wimmerová, M., Mitchell, E. P. & Imberty, A. | Structural basis for the interaction between human milk oligosaccharides and the bacterial lectin PA-IIL of Pseudomonas aeruginosa | 2005 | Biochem J | article | URL |
| Nanao, M. H., Sheldrick, G. M. & Ravelli, R. B. | Improving radiation-damage substructures for RIP | 2005 | Acta~Cryst.~D | article | URL |
| Murray, J. W., Rudiño-Piñera, E., Owen, R. L., Grininger, M., Ravelli, R. B. & Garman, E. F. | Parameters affecting the X-ray dose absorbed by macromolecular crystals | 2005 | J Synchrotron Radiat | article | URL |
| Mitschke, M., Pernot, P., Helfen, S., Zwerger, A. & Baumbach, T. | "In-situ" observation of dynamical diffraction by means of Medipix2 sensor crystals fulfiling Bragg condition | 2005 | NIM A | article | |
| Mitchell, E. P., Sabin, C., Snajdrová, L., Pokorná, M., Perret, S., Gautier, C., Hofr, C., Gilboa-Garber, N., Koca, J., Wimmerová, M. & Imberty, A. | High affinity fucose binding of Pseudomonas aeruginosa lectin PA-IIL: 1.0 resolution crystal structure of the complex combined with thermodynamics and computational chemistry approaches | 2005 | Proteins | article | URL |
| Leonard, G. A., Sainz, G., de Backer, M. M. & McSweeney, S. | Automatic structure determination based on the single-wavelength anomalous diffraction technique away from an absorption edge | 2005 | Acta~Cryst.~D | article | URL |
| Leiros, I., Timmins, J., Hall, D. R. & McSweeney, S. | Crystal structure and DNA-binding analysis of RecO from Deinococcus radiodurans | 2005 | EMBO J | article | URL |
| Leiros, I., Moe, E., Smals, A. O. & McSweeney, S. | Structure of the uracil-DNA N-glycosylase (UNG) from Deinococcus radiodurans | 2005 | Acta~Cryst.~D | article | URL |
| Lübbert, D., Ferrari, C., Mikulik, P., Pernot, P., Helfen, L., Verdi, N., Villeggi, E., D., K. & Baumbach, T. | Distribution and Burgers vectors of dislocations in semiconductor wafers investigated byRocking Curve Imaging | 2005 | J.~Appl.~Cryst. | article | |
| Lübbert, D., Baumbach, T., Mikulik, P., Pernot, P., Helfen, L., Köhler, R., Katona, T., S., K. & S.P., D. | Local wing tilt analysis of laterally overgrown GaN by X-ray Rocking Curve Imaging | 2005 | J. Phys. D: Appl. Phys. | article | |
| Kostlánová, N., Mitchell, E. P., Lortat-Jacob, H., Oscarson, S., Lahmann, M., Gilboa-Garber, N., Chambat, G., Wimmerová, M. & Imberty, A. | The fucose-binding lectin from Ralstonia solanacearum. A new type of beta-propeller architecture formed by oligomerization and interacting with fucoside, fucosyllactose, and plant xyloglucan | 2005 | J Biol Chem | article | URL |
| Imberty, A., Mitchell, E. P. & Wimmerová, M. | Structural basis of high-affinity glycan recognition by bacterial and fungal lectins | 2005 | Curr Opin Struct Biol | article | URL |
| Helfen, L., Baumbach, T., Pernot, P., Stanzick, H., Schladitz, K. & Banhart, J. | Investigation of pore initiation in metal foams by synchrotron-radioation tomography | 2005 | J. Appl. Phys. | article | |
| Helfen, L., Baumbach, T., Mikulik, P., Kiel, D., Pernot, P., P., C. & Baruchel, J. | High-Resolution Three-Dimensional Imaging of Flat Objects by Synchrotron-Radiation Computed Laminography | 2005 | Appl. Phys. Lett. | article | |
| Guimarães, B. G., Souchon, H., Honoré, N., Saint-Joanis, B., Brosch, R., Shepard, W., Cole, S. T. & Alzari, P. M. | Structure and mechanism of the alkyl hydroperoxidase AhpC, a key element of the Mycobacterium tuberculosis defense system against oxidative stress | 2005 | J Biol Chem | article | URL |
| Gigant, B., Wang, C., Ravelli, R. B., Roussi, F., Steinmetz, M. O., Curmi, P. A., Sobel, A. & Knossow, M. | Structural basis for the regulation of tubulin by vinblastine | 2005 | Nature | article | URL |
| Flint, J., Bolam, D. N., Nurizzo, D., Taylor, E. J., Williamson, M. P., Walters, C., Davies, G. J. & Gilbert, H. J. | Probing the mechanism of ligand recognition in family 29 carbohydrate-binding modules | 2005 | J Biol Chem | article | URL |
| Fioravanti, E., Adam, V., Munier-Lehmann, H. & Bourgeois, D. | The crystal structure of Mycobacterium tuberculosis thymidylate kinase in complex with 3'-azidodeoxythymidine monophosphate suggests a mechanism for competitive inhibition | 2005 | Biochemistry | article | URL |
| Ernst, H. A., Willemoés, M., Lo Leggio, L., Leonard, G., Blum, P. & Larsen, S. | Characterization of different crystal forms of the alpha-glucosidase MalA from Sulfolobus solfataricus | 2005 | Acta Cryst. F | article | URL |
| Dubnovitsky, A. P., Ravelli, R. B., Popov, A. N. & Papageorgiou, A. C. | Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage | 2005 | Protein Sci | article | URL |
| Bourgeois, D. & Royant, A. | Advances in kinetic protein crystallography | 2005 | Curr Opin Struct Biol | article | URL |
| Backe, P. H., Messias, A. C., Ravelli, R. B. G., Sattler, M. & Cusack, S. | X-Ray Crystallographic and NMR Studies of the Third KH Domain of hnRNP K in Complex with Single-Stranded Nucleic Acids | 2005 | Structure | article | |
| Arzt, S., Beteva, A., Cipriani, F., Delageniere, S., Felisaz, F., Förstner, G., Gordon, E., Launer, L., Lavault, B., Leonard, G., Mairs, T., McCarthy, A., McCarthy, J., McSweeney, S., Meyer, J., Mitchell, E., Monaco, S., Nurizzo, D., Ravelli, R., Rey, V., Shepard, W., Spruce, D., Svensson, O. & Theveneau, P. | Automation of macromolecular crystallography beamlines | 2005 | Prog Biophys Mol Biol | article | URL |
| Artero, J. B., Härtlein, M., McSweeney, S. & Timmins, P. | A comparison of refined X-ray structures of hydrogenated and perdeuterated rat gammaE-crystallin in H2O and D2O | 2005 | Acta~Cryst.~D | article | URL |
| Weik, M., Vernede, X., Royant, A. & Bourgeois, D. | Temperature derivative fluorescence spectroscopy as a tool to study dynamical changes in protein crystals | 2004 | Biophys J | article | URL |
| Terradot, L., Durnell, N., Li, M., Li, M., Ory, J., Labigne, A., Legrain, P., Colland, F. & Waksman, G. | Biochemical characterization of protein complexes from the Helicobacter pylori protein interaction map: strategies for complex formation and evidence for novel interactions within type IV secretion systems | 2004 | Mol Cell Proteomics | article | URL |
| Sudakevitz, D., Kostlánová, N., Blatman-Jan, G., Mitchell, E. P., Lerrer, B., Wimmerová, M., Katcoff, D. J., Imberty, A. & Gilboa-Garber, N. | A new Ralstonia solanacearum high-affinity mannose-binding lectin RS-IIL structurally resembling the Pseudomonas aeruginosa fucose-specific lectin PA-IIL | 2004 | Mol Microbiol | article | URL |
| Soler-Lopez, M., Petosa, C., Fukuzawa, M., Ravelli, R. B. G., Williams, J. G. & Muller, C. W. | Structure of an activated Dictyostelium STAT in its DNA-unbound form | 2004 | Mol Cell | article | |
| Smirnova, I. A., Dian, C., Leonard, G. A., McSweeney, S., Birse, D. & Brzezinski, P. | Development of a bacterial biosensor for nitrotoluenes: the crystal structure of the transcriptional regulator DntR | 2004 | J Mol Biol | article | URL |
| Rencurosi, A., Mitchell, E. P., Cioci, G., Pérez, S., Pereda-Miranda, R. & Imberty, A. | Crystal structure of tricolorin A: molecular rationale for the biological properties of resin glycosides found in some Mexican herbal remedies | 2004 | Angew Chem Int Ed Engl | article | URL |
| Ravelli, R. B., Gigant, B., Curmi, P. A., Jourdain, I., Lachkar, S., Sobel, A. & Knossow, M. | Insight into tubulin regulation from a complex with colchicine and a stathmin-like domain | 2004 | Nature | article | URL |
| Meunier-Jamin, C., Kapp, U., Leonard, G. & McSweeney, S. | Expression, purification, crystallization and preliminary crystal structure analysis of the Deinococcus radiodurans organic hydroperoxide-resistance protein | 2004 | Acta~Cryst.~D | article | URL |
| Meunier-Jamin, C., Kapp, U., Leonard, G. A. & McSweeney, S. | The structure of the organic hydroperoxide resistance protein from Deinococcus radiodurans. Do conformational changes facilitate recycling of the redox disulfide? | 2004 | J Biol Chem | article | URL |
| McCarthy, A. A., Peterson, N. A., Knijff, R. & Baker, E. N. | Crystal structure of MshB from Mycobacterium tuberculosis, a deacetylase involved in mycothiol biosynthesis | 2004 | J Mol Biol | article | URL |
| Mavrakis, M., McCarthy, A. A., Roche, S., Blondel, D. & Ruigrok, R. W. | Structure and function of the C-terminal domain of the polymerase cofactor of rabies virus | 2004 | J Mol Biol | article | URL |
| Leiros, I., McSweeney, S. & Hough, E. | The reaction mechanism of phospholipase D from Streptomyces sp. strain PMF. Snapshots along the reaction pathway reveal a pentacoordinate reaction intermediate and an unexpected final product | 2004 | J Mol Biol | article | URL |
| Leiros, H. K., Kozielski-Stuhrmann, S., Kapp, U., Terradot, L., Leonard, G. A. & McSweeney, S. M. | Structural basis of 5-nitroimidazole antibiotic resistance: the crystal structure of NimA from Deinococcus radiodurans | 2004 | J Biol Chem | article | URL |
| Kort, R., Hellingwerf, K. J. & Ravelli, R. B. | Initial events in the photocycle of photoactive yellow protein | 2004 | J Biol Chem | article | URL |
| Jamal, S., Nurizzo, D., Boraston, A. B. & Davies, G. J. | X-ray crystal structure of a non-crystalline cellulose-specific carbohydrate-binding module: CBM28 | 2004 | J Mol Biol | article | URL |
| Imberty, A., wimmerová, M., Mitchell, E. P. & Gilboa-Garber, N. | Structures of the lectins from Pseudomonas aeruginosa: insight into the molecular basis for host glycan recognition | 2004 | Microbes Infect | article | URL |
| Harel, M., Aharoni, A., Gaidukov, L., Brumshtein, B., Khersonsky, O., Meged, R., Dvir, H., Ravelli, R. B., McCarthy, A., Toker, L., Silman, I., Sussman, J. L. & Tawfik, D. S. | Structure and evolution of the serum paraoxonase family of detoxifying and anti-atherosclerotic enzymes | 2004 | Nat Struct Mol Biol | article | URL |
| Grininger, M., Ravelli, R. B., Heider, U. & Zeth, K. | Expression, crystallization and crystallographic analysis of DegS, a stress sensor of the bacterial periplasm | 2004 | Acta~Cryst.~D | article | URL |
| Flint, J., Nurizzo, D., Harding, S. E., Longman, E., Davies, G. J., Gilbert, H. J. & Bolam, D. N. | Ligand-mediated dimerization of a carbohydrate-binding molecule reveals a novel mechanism for protein-carbohydrate recognition | 2004 | J Mol Biol | article | URL |
| Edman, K., Royant, A., Larsson, G., Jacobson, F., Taylor, T., van der Spoel, D., Landau, E. M., Pebay-Peyroula, E. & Neutze, R. | Deformation of helix C in the low temperature L-intermediate of bacteriorhodopsin | 2004 | J Biol Chem | article | URL |
| Dias, J. M., Alves, T., Bonifácio, C., Pereira, A. S., Trincão, J., Bourgeois, D., Moura, I. & Romão, M. J. | Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617 | 2004 | Structure | article | URL |
| Campanacci, V., Nurizzo, D., Spinelli, S., Valencia, C., Tegoni, M. & Cambillau, C. | The crystal structure of the Escherichia coli lipocalin Blc suggests a possible role in phospholipid binding | 2004 | FEBS Lett | article | URL |
| Buschiazzo, A., Ugalde, J. E., Guerin, M. E., Shepard, W., Ugalde, R. A. & Alzari, P. M. | Crystal structure of glycogen synthase: homologous enzymes catalyze glycogen synthesis and degradation | 2004 | EMBO J | article | URL |
| Brunori, M., Bourgeois, D. & Vallone, B. | The structural dynamics of myoglobin | 2004 | J Struct Biol | article | URL |
| de Backer, M. M., McSweeney, S., Lindley, P. F. & Hough, E. | Ligand-binding and metal-exchange crystallographic studies on shrimp alkaline phosphatase | 2004 | Acta~Cryst.~D | article | URL |
| Backe, P. H., Ravelli, R. B., Garman, E. & Cusack, S. | Crystallization, microPIXE and preliminary crystallographic analysis of the complex between the third KH domain of hnRNP K and single-stranded DNA | 2004 | Acta~Cryst.~D | article | URL |
| Adam, V., Royant, A., Nivière, V., Molina-Heredia, F. P. & Bourgeois, D. | Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray-induced photo-reduction | 2004 | Structure | article | URL |
| Wimmerova, M., Mitchell, E., Sanchez, J., Gautier, C. & Imberty, A. | Crystal Structure of Fungal Lectin: SIX-BLADED beta-PROPELLER FOLD AND NOVEL FUCOSE RECOGNITION MODE FOR ALEURIA AURANTIA LECTIN | 2003 | J. Biol. Chem. | article | URL |
| Richard, P., Philippe, P., Barbe, F., Bourlès, S., Thibault, X. & Bideau, D. | Analysis by x-ray microtomography of a granular packing undergoing compaction | 2003 | Phys Rev E Stat Nonlin Soft Matter Phys | article | URL |
| Ravelli, R. B., Leiros, H. K., Pan, B., Caffrey, M. & McSweeney, S. | Specific radiation damage can be used to solve macromolecular crystal structures | 2003 | Structure | article | URL |
| Nurizzo, D., Shewry, S. C., Perlin, M. H., Brown, S. A., Dholakia, J. N., Fuchs, R. L., Deva, T., Baker, E. N. & Smith, C. A. | The crystal structure of aminoglycoside-3'-phosphotransferase-IIa, an enzyme responsible for antibiotic resistance | 2003 | J Mol Biol | article | URL |
| Nagy, T., Nurizzo, D., Davies, G. J., Biely, P., Lakey, J. H., Bolam, D. N. & Gilbert, H. J. | The alpha-glucuronidase, GlcA67A, of Cellvibrio japonicus utilizes the carboxylate and methyl groups of aldobiouronic acid as important substrate recognition determinants | 2003 | J Biol Chem | article | URL |
| Miallau, L., Alphey, M. S., Kemp, L. E., Leonard, G. A., McSweeney, S. M., Hecht, S., Bacher, A., Eisenreich, W., Rohdich, F. & Hunter, W. N. | Biosynthesis of isoprenoids: crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol kinase | 2003 | Proc Natl Acad Sci U S A | article | URL |
| Macedo, S., Romao, C. V., Mitchell, E., Matias, P. M., Liu, M. Y., Xavier, A. V., LeGall, J., Teixeira, M., Lindley, P. & Carrondo, M. A. | The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans | 2003 | Nat Struct Mol Biol | article | |
| Macedo, S., Aragão, D., Mitchell, E. P. & Lindley, P. | Structure of the hybrid cluster protein (HCP) from Desulfovibrio desulfuricans ATCC 27774 containing molecules in the oxidized and reduced states | 2003 | Acta~Cryst.~D | article | URL |
| Kort, R., Ravelli, R. B. G., Schotte, F., Bourgeois, D., Crielaard, W., Hellingwerf, K. J. & Wulff, M. | Characterization of photocycle intermediates in crystalline photoactive yellow protein | 2003 | Photochem Photobiol | article | |
| Kort, R., Ravelli, R. B., Schotte, F., Bourgeois, D., Crielaard, W., Hellingwerf, K. J. & Wulff, M. | Characterization of photocycle intermediates in crystalline photoactive yellow protein | 2003 | Photochem Photobiol | article | URL |
| Jeppesen, M. G., Ortiz, P., Shepard, W., Kinzy, T. G., Nyborg, J. & Andersen, G. R. | The crystal structure of the glutathione S-transferase-like domain of elongation factor 1betagamma from Saccharomyces cerevisiae | 2003 | J Biol Chem | article | URL |
| Helfen, L., Stanzick, H., Ohser, J., Schladitz, K., Pernot, P., J., B. & Baumbach, T. | Investigation of the Foaming Process of Metals by Synchrotron-Radiation Imaging | 2003 | Proc. SPIE | incollection | |
| Heikinheimo, P., Helland, R., Leiros, H. K., Leiros, I., Karlsen, S., Evjen, G., Ravelli, R., Schoehn, G., Ruigrok, R., Tollersrud, O. K., McSweeney, S. & Hough, E. | The structure of bovine lysosomal alpha-mannosidase suggests a novel mechanism for low-pH activation | 2003 | J Mol Biol | article | URL |
| Hall, D. R., Kemp, L. E., Leonard, G. A., Marshall, K., Berry, A. & Hunter, W. N. | The organization of divalent cations in the active site of cadmium Escherichia coli fructose-1,6-bisphosphate aldolase | 2003 | Acta~Cryst.~D | article | URL |
| Fioravanti, E., Haouz, A., Ursby, T., Munier-Lehmann, H., Delarue, M. & Bourgeois, D. | Mycobacterium tuberculosis thymidylate kinase: structural studies of intermediates along the reaction pathway | 2003 | J Mol Biol | article | URL |
| Dvir, H., Harel, M., McCarthy, A. A., Toker, L., Silman, I., Futerman, A. H. & Sussman, J. L. | X-ray structure of human acid-beta-glucosidase, the defective enzyme in Gaucher disease | 2003 | EMBO Rep | article | URL |
| Diederichs, K., McSweeney, S. & Ravelli, R. B. | Zero-dose extrapolation as part of macromolecular synchrotron data reduction | 2003 | Acta~Cryst.~D | article | URL |
| Cioci, G., Mitchell, E. P., Gautier, C., Wimmerová, M., Sudakevitz, D., Pérez, S., Gilboa-Garber, N. & Imberty, A. | Structural basis of calcium and galactose recognition by the lectin PA-IL of Pseudomonas aeruginosa | 2003 | FEBS Lett | article | URL |
| Bourgeois, D., Vallone, B., Schotte, F., Arcovito, A., Miele, A. E., Sciara, G., Wulff, M., Anfinrud, P. & Brunori, M. | Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography | 2003 | Proc Natl Acad Sci U S A | article | URL |
| Boraston, A. B., Revett, T. J., Boraston, C. M., Nurizzo, D. & Davies, G. J. | Structural and thermodynamic dissection of specific mannan recognition by a carbohydrate binding module, TmCBM27 | 2003 | Structure | article | URL |
| Aragão, D., Macedo, S., Mitchell, E. P., Romão, C. V., Liu, M. Y., Frazão, C., Saraiva, L. M., Xavier, A. V., LeGall, J., van Dongen, W. M., Hagen, W. R., Teixeira, M., Carrondo, M. A. & Lindley, P. | Reduced hybrid cluster proteins (HCP) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at high resolution using synchrotron radiation | 2003 | J Biol Inorg Chem | article | URL |
| Alphey, M. S., Gabrielsen, M., Micossi, E., Leonard, G. A., McSweeney, S. M., Ravelli, R. B., Tetaud, E., Fairlamb, A. H., Bond, C. S. & Hunter, W. N. | Tryparedoxins from Crithidia fasciculata and Trypanosoma brucei: photoreduction of the redox disulfide using synchrotron radiation and evidence for a conformational switch implicated in function | 2003 | J Biol Chem | article | URL |
| Zeth, K., Ravelli, R. B., Paal, K., Cusack, S., Bukau, B. & Dougan, D. A. | Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA | 2002 | Nat Struct Biol | article | URL |
| Zeth, K., Dougan, D. A., Cusack, S., Bukau, B. & Ravelli, R. B. | Crystallization and preliminary X-ray analysis of the Escherichia coli adaptor protein ClpS, free and in complex with the N-terminal domain of ClpA | 2002 | Acta~Cryst.~D | article | URL |
| Weik, M., Bergès, J., Raves, M. L., Gros, P., McSweeney, S., Silman, I., Sussman, J. L., Houée-Levin, C. & Ravelli, R. B. | Evidence for the formation of disulfide radicals in protein crystals upon X-ray irradiation | 2002 | J Synchrotron Radiat | article | URL |
| Ursby, T., Weik, M., Fioravanti, E., Delarue, M., Goeldner, M. & Bourgeois, D. | Cryophotolysis of caged compounds: a technique for trapping intermediate states in protein crystals | 2002 | Acta~Cryst.~D | article | URL |
| Sun, W., Arese, M., Brunori, M., Nurizzo, D., Brown, K., Cambillau, C., Tegoni, M. & Cutruzzolà, F. | Cyanide binding to cd(1) nitrite reductase from Pseudomonas aeruginosa: role of the active-site His369 in ligand stabilization | 2002 | Biochem Biophys Res Commun | article | URL |
| Sauvage, E., Kerff, F., Fonzé, E., Herman, R., Schoot, B., Marquette, J. P., Taburet, Y., Prevost, D., Dumas, J., Leonard, G., Stefanic, P., Coyette, J. & Charlier, P. | The 2.4 crystal structure of the penicillin-resistant penicillin-binding protein PBP5fm from Enterococcus faecium in complex with benzylpenicillin | 2002 | Cell Mol Life Sci | article | URL |
| Royant, A., Grizot, S., Kahn, R., Belrhali, H., Fieschi, F., Landau, E. M. & Pebay-Peyroula, E. | Detection and characterization of merohedral twinning in two protein crystals: bacteriorhodopsin and p67(phox) | 2002 | Acta~Cryst.~D | article | URL |
| Ravelli, R. B., Theveneau, P., McSweeney, S. & Caffrey, M. | Unit-cell volume change as a metric of radiation damage in crystals of macromolecules | 2002 | J Synchrotron Radiat | article | URL |
| Pebay-Peyroula, E., Royant, A., Landau, E. M. & Navarro, J. | Structural basis for sensory rhodopsin function | 2002 | Biochim Biophys Acta | article | URL |
| Nurizzo, D., Turkenburg, J. P., Charnock, S. J., Roberts, S. M., Dodson, E. J., McKie, V. A., Taylor, E. J., Gilbert, H. J. & Davies, G. J. | Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold | 2002 | Nat Struct Biol | article | URL |
| Nurizzo, D., Nagy, T., Gilbert, H. J. & Davies, G. J. | The structural basis for catalysis and specificity of the Pseudomonas cellulosa alpha-glucuronidase, GlcA67A | 2002 | Structure | article | URL |
| Neutze, R., Pebay-Peyroula, E., Edman, K., Royant, A., Navarro, J. & Landau, E. M. | Bacteriorhodopsin: a high-resolution structural view of vectorial proton transport | 2002 | Biochim Biophys Acta | article | URL |
| Mitchell, E., Houles, C., Sudakevitz, D., Wimmerova, M., Gautier, C., Perez, S., Wu, A. M., Gilboa-Garber, N. & Imberty, A. | Structural basis for oligosaccharide-mediated adhesion of Pseudomonas aeruginosa in the lungs of cystic fibrosis patients | 2002 | Nat Struct Mol Biol | article | |
| Micossi, E., Hunter, W. N. & Leonard, G. A. | De novo phasing of two crystal forms of tryparedoxin II using the anomalous scattering from S atoms: a combination of small signal and medium resolution reveals this to be a general tool for solving protein crystal structures | 2002 | Acta~Cryst.~D | article | URL |
| McCarthy, A. A., Walsh, M. A., Verma, C. S., O'Connell, D. P., Reinhold, M., Yalloway, G. N., D'Arcy, D., Higgins, T. M., Voordouw, G. & Mayhew, S. G. | Crystallographic investigation of the role of aspartate 95 in the modulation of the redox potentials of Desulfovibrio vulgaris flavodoxin | 2002 | Biochemistry | article | URL |
| Macedo, S., Mitchell, E. P., Romão, C. V., Cooper, S. J., Coelho, R., Liu, M. Y., Xavier, A. V., LeGall, J., Bailey, S., Garner, D. C., Hagen, W. R., Teixeira, M., Carrondo, M. A. & Lindley, P. | Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 resolution using synchrotron radiation | 2002 | J Biol Inorg Chem | article | URL |
| Leslie, A. G., Powell, H. R., Winter, G., Svensson, O., Spruce, D., McSweeney, S., Love, D., Kinder, S., Duke, E. & Nave, C. | Automation of the collection and processing of X-ray diffraction data -- a generic approach | 2002 | Acta~Cryst.~D | article | URL |
| Lescar, J., Loris, R., Mitchell, E., Gautier, C., Chazalet, V., Cox, V., Wyns, L., Perez, S., Breton, C. & Imberty, A. | Isolectins I-A and I-B of Griffonia (Bandeiraea) simplicifolia. | 2002 | J. Biol. Chem. | article | URL |
| Kuser, P., Hall, D. R., Haw, M. L., Neu, M., Evans, R. W. & Lindley, P. F. | The mechanism of iron uptake by transferrins: the X-ray structures of the 18 kDa NII domain fragment of duck ovotransferrin and its nitrilotriacetate complex | 2002 | Acta~Cryst.~D | article | URL |
| Hall, D. R., Hadden, J. M., Leonard, G. A., Bailey, S., Neu, M., Winn, M. & Lindley, P. F. | The crystal and molecular structures of diferric porcine and rabbit serum transferrins at resolutions of 2.15 and 2.60 , respectively | 2002 | Acta~Cryst.~D | article | URL |
| Hall, D. R., Bond, C. S., Leonard, G. A., Watt, C. I., Berry, A. & Hunter, W. N. | Structure of tagatose-1,6-bisphosphate aldolase. Insight into chiral discrimination, mechanism, and specificity of class II aldolases | 2002 | J Biol Chem | article | URL |
| Edman, K., Royant, A., Nollert, P., Maxwell, C. A., Pebay-Peyroula, E., Navarro, J., Neutze, R. & Landau, E. M. | Early structural rearrangements in the photocycle of an integral membrane sensory receptor | 2002 | Structure | article | URL |
| Dian, C., Eshaghi, S., Urbig, T., McSweeney, S., Heijbel, A., Salbert, G. & Birse, D. | Strategies for the purification and on-column cleavage of glutathione-S-transferase fusion target proteins | 2002 | J Chromatogr B Analyt Technol Biomed Life Sci | article | URL |
| Coste, F., Shepard, W. & Zelwer, C. | Description of ordered solvent molecules in a platinated decanucleotide duplex refined at 1.6 resolution against experimental MAD phases | 2002 | Acta~Cryst.~D | article | URL |
| Charnock, S. J., Bolam, D. N., Nurizzo, D., Szabó, L., McKie, V. A., Gilbert, H. J. & Davies, G. J. | Promiscuity in ligand-binding: The three-dimensional structure of a Piromyces carbohydrate-binding module, CBM29-2, in complex with cello- and mannohexaose | 2002 | Proc Natl Acad Sci U S A | article | URL |
| Boraston, A. B., Nurizzo, D., Notenboom, V., Ducros, V., Rose, D. R., Kilburn, D. G. & Davies, G. J. | Differential oligosaccharide recognition by evolutionarily-related beta-1,4 and beta-1,3 glucan-binding modules | 2002 | J Mol Biol | article | URL |
| Blankenfeldt, W., Kerr, I. D., Giraud, M. F., McMiken, H. J., Leonard, G., Whitfield, C., Messner, P., Graninger, M. & Naismith, J. H. | Variation on a theme of SDR. dTDP-6-deoxy-L- lyxo-4-hexulose reductase (RmlD) shows a new Mg2+-dependent dimerization mode | 2002 | Structure | article | URL |
| de Backer, M., McSweeney, S., Rasmussen, H. B., Riise, B. W., Lindley, P. & Hough, E. | The 1.9 crystal structure of heat-labile shrimp alkaline phosphatase | 2002 | J Mol Biol | article | URL |
| Weik, M., Ravelli, R. B., Silman, I., Sussman, J. L., Gros, P. & Kroon, J. | Specific protein dynamics near the solvent glass transition assayed by radiation-induced structural changes | 2001 | Protein Sci | article | URL |
| Srajer, V., Ren, Z., Teng, T. Y., Schmidt, M., Ursby, T., Bourgeois, D., Pradervand, C., Schildkamp, W., Wulff, M. & Moffat, K. | Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction | 2001 | Biochemistry | article | URL |
| Specht, A., Ursby, T., Weik, M., Peng, L., Kroon, J., Bourgeois, D. & Goeldner, M. | Cryophotolysis of ortho-nitrobenzyl derivatives of enzyme ligands for the potential kinetic crystallography of macromolecules | 2001 | Chembiochem | article | URL |
| Sanders, D. A. R., McMahon, S. A., Leonard, G. A. & Naismith, J. H. | Molecular placement of experimental electron density: a case study on UDP-galactopyranose mutase | 2001 | Acta~Cryst.~D | article | URL |
| Ren, Z., Perman, B., Srajer, V., Teng, T. Y., Pradervand, C., Bourgeois, D., Schotte, F., Ursby, T., Kort, R., Wulff, M. & Moffat, K. | A molecular movie at 1.8 resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds | 2001 | Biochemistry | article | URL |
| Nurizzo, D., Halbig, D., Sprenger, G. A. & Baker, E. N. | Crystal structures of the precursor form of glucose-fructose oxidoreductase from Zymomonas mobilis and its complexes with bound ligands | 2001 | Biochemistry | article | URL |
| Mitchell, E. P. | The Joint Structural Biology Group beam lines at the ESRF: : Modern macromolecular crystallography | 2001 | NIM A | article | URL |
| McIlwraith, M. J., Hall, D. R., Stasiak, A. Z., Stasiak, A., Wigley, D. B. & West, S. C. | RadA protein from Archaeoglobus fulgidus forms rings, nucleoprotein filaments and catalyses homologous recombination | 2001 | Nucleic Acids Res | article | URL |
| McCarthy, A. A., Baker, H. M., Shewry, S. C., Patchett, M. L. & Baker, E. N. | Crystal structure of methylmalonyl-coenzyme A epimerase from P. shermanii: a novel enzymatic function on an ancient metal binding scaffold | 2001 | Structure | article | URL |
| Leiros, H. K., McSweeney, S. M. & Smals, A. O. | Atomic resolution structures of trypsin provide insight into structural radiation damage | 2001 | Acta~Cryst.~D | article | URL |
| Gourley, D. G., Schüttelkopf, A. W., Leonard, G. A., Luba, J., Hardy, L. W., Beverley, S. M. & Hunter, W. N. | Pteridine reductase mechanism correlates pterin metabolism with drug resistance in trypanosomatid parasites | 2001 | Nat Struct Biol | article | URL |
| Gordon, E. J., Leonard, G. A., McSweeney, S. & Zagalsky, P. F. | The C1 subunit of alpha-crustacyanin: the de novo phasing of the crystal structure of a 40 kDa homodimeric protein using the anomalous scattering from S atoms combined with direct methods | 2001 | Acta~Cryst.~D | article | URL |
| Czjzek, M., Arnoux, P., Haser, R. & Shepard, W. | Structure of cytochrome c7 from Desulfuromonas acetoxidans at 1.9 resolution | 2001 | Acta~Cryst.~D | article | URL |
| Cotton, N. P., White, S. A., Peake, S. J., McSweeney, S. & Jackson, J. B. | The crystal structure of an asymmetric complex of the two nucleotide binding components of proton-translocating transhydrogenase | 2001 | Structure | article | URL |
| Budayova-Spano, M., Shepard, W., Schoot, B., Astier, J. P. & Veesler, S. | Crystallization of a recombinant form of the complete sequence of human gamma-interferon: characterization by small-angle X-ray scattering, mass spectrometry and preliminary X-ray diffraction studies | 2001 | Acta~Cryst.~D | article | URL |
| Banfield, M. J., Lott, J. S., Arcus, V. L., McCarthy, A. A. & Baker, E. N. | Structure of HisF, a histidine biosynthetic protein from Pyrobaculum aerophilum | 2001 | Acta~Cryst.~D | article | URL |