Database SOrganic

last modified 02-06-2009 15:42

This database of S K-edge XANES spectra of sulfur reference compounds has been created thanks to the contribution of the users at ID21. All the references were acquired on ID21. For each reference compound, you will find information about the chemical specificity and about the acquisition mode in this table. The data are also available.

In case of use of these data, we would be grateful if you can cite the database reference and also the bibliographic reference if available. You can also contact the person who acquired the spectrum for more information about the sample. You will find their address by clicking on their name.

This page "database S organic" is dedicated to the sulfur organic compounds and in the second page "database S compound", you will find information related to the mineralogical and chemical sulfur reference compounds.   

The calibration value in keV was defined as the maximum of white-line of the gypsum reference acquired for each experiment. This value is given to be able to calibrate together the different spectra, which may have been acquired during different experiments.

Feel free to contact us in order to report mistakes or modifications and also to propose your own reference.

Summary of the content of the database:

  1. Chemical specificity of the reference compounds
  2. S chemical environment
  3. Origins of the compound and its conditioning
  4. Bibliographic references and related acknowledgment
  5. Information about the acquisition modes (type of detector, fluorescence or transmission geometry, macro or microbeam)


ID21 Team

 

Chemical name Formula Substance or family Formal oxidation state Environment Acquisition mode Calibration Contact person Bibliographic references Normalized X-ray absorption data Spectrum
anthraquinone sulfonic acid comC14 H7 Na O5 S sulfonate 5 SO3 transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/Anthraquinone_Sulfonic_acid_trans_norm.dat organic compounds/antraquinone_sulfonc_acid_trans_norm.JPG
chondroitine sulfate Chondroitin_sulfate sulfate 6 R-O-SO3- fluorescence
transmission
2.4827
Jean-Pierre Cuif
Dauphin, Cuif et al., Marine Biology, 2003, Vol.142, pp.299-304;
Cuif, Dauphin et al., Geochemica Cosmochemica Acta, 2003, Vol. 67(1), pp.75-83
chondroitine_sulfate_F_norm.dat
chondroitine_sulfate_T_norm.dat
chondroitine_sulfate_F.jpg
chondroitine_sulfate_T.jpg
cysteine cysteine C3H7NO2S amino acid
thiols
-1 R-SH fluorescence ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/cysteine_F_norm.dat organic compounds/cysteine_F_norm.JPG
L-cysteine cysteine C3H7NO2S amino acid
thiols
-1 R-SH transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/L_cysteine_T_norm.dat organic compounds/L-cysteine_T_norm.JPG
S-methyl-L-cysteine com C4H9NO2S amino acid
thiols
-1 R-SH transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/S-methyl-L-cysteine_T_norm.dat organic compounds/S-methyl-L-cysteine_T_norm.JPG
L-cysteine-S-sulfate C3H7NO5S2 amino acid thiols
sulfate
6 and -1
transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/L_cysteine_S_sulfate_T_norm.dat organic compounds/L-cysteine-S-sulfate_T_norm.JPG
L-cysteinic acid
L-cysteic acid
com
C3H7NO5S . H2O
sulfonate 5 R-O-S-(O)2 fluorescence, transmission ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
cysteic acid_F_norm.dat
organic compounds/cysteic acid_T_norm.dat
cysteic acid_F_norm.JPG
organic compounds/cysteic acid_T_norm.JPG
dibenzothiophene (DBT) com
C12H8S
thiophene 0
transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/Dibenzothiophene_T_norm.dat
dibenzothiophene_T_norm.JPG
dimethylsulfoxide com

C2H6SO
sulfoxide 2 R-S=O fluorescence ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/dimethylsulfoxide_F_norm.dat organic compounds/dimethylsulfoxide_F_norm.JPG
methionine methionine
C5H11NO2S
amino acid
organic monosulfide
0 R-S-R' fluorescence ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/methionine_F_norm.dat organic compounds/methionine_F_norm.JPG
transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/L-methionine_T_norm.dat organic compounds/L-methionine_T_norm.JPG



DL methionine methylsulfonium chloride
com

C6H14NO2ClS




sulfonium




1



R
R-S+-R




transmission




2.4827




Sylvain Bohic

Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print]




DLmethioninemethylsulfonium_Chloride_trans_norm.dat




DL_methionine_methyl_sulfonium_trans.JPG
DL-methionine sulfone com
C5H11NO4S
sulfone 4 R-S(=O)2 transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/DL_methionine_sulfone_trans_norm.dat organic compounds/DL_methionine_sulfone_trans_norm.JPG
DL-methionine sulfoxide com
C5H11NO3S
sulfoxide 2 R-S=O transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/DL_methionine_sulfoxide_trans_norm.dat organic compounds/DL_methionine_sulfoxide_trans.JPG
L-cystine com
C6H12N2O4S2
amino acid
organic disulfide
0 R-S-S-R' fluorescence ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/L-cystine_F_norm.dat organic compounds/L-cystine_F_norm.JPG
transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/L-cystine_T_norm.dat organic compounds/L-cystine_T_norm.JPG
phenylene disulfide _NXPNKONCFHNBQNKQNHGNNMPOLZNSHH_
C12H10S2
aryl-disulfide 0,2 R-S-S-R fluorescence transmission
2.4826
Laurence Lemelle
Frances Westall
Lemelle et al., Organic Geochemistry, 2008, 39(2), 188-202
phenylene_disulfide_T_norm.dat
phenylene_disulfide_T_norm.JPG
polyphenylene sulfide (PPT) _NXPNKONCFHNBQNKQNHGNNMPOLZNSHH_
C6H5S
aryl-monosulfide 0,5 R-S fluorescence transmission
2.4826
Laurence Lemelle
Frances Westall
Lemelle et al., Organic Geochemistry, 2008, 39(2), 188-202 polyphenylene_sulfide_T_norm.dat
polyphenylene_sulfide_T_norm.JPG
oxidized glutathion com
C10H17N3O6S
amino acid
thiols
-1 R-SH transmission
fluorescence
ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/glutathion_oxidized_T_norm.dat organic compounds/glutathion_ox_T_norm.JPG
organic compounds/glutathion_oxidized_F_norm.dat organic compounds/glutathion_ox_F_norm.JPG
reduced glutathion com
C10H17N3O6S
amino acid
thiols
-1 R-SH fluorescence, transmission ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/glutathion_reduced_T_norm.dat organic compounds/glutathion_red_T_norm.JPG
organic compounds/glutathion_reduced_F_norm.dat organic compounds/glutathion_red_F_norm.JPG
sodium tetrathionate dihydrate com

H4O8Na2S4
sulfide 0 and 6 SO3--S-S-SO3- fluorescence ZnSO4 at 2.4825 keV Magdalena Szczerbowska-Boruchowska
organic compounds/Natetrathionate_2H2O_F_norm.dat organic compounds/Natetrathionate_2H2O_F_norm.JPG
taurine com

C2H7NO3S
sulfonate 5 SO3 transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] Taurine_trans_norm.dat
Taurine_T.JPG
thianthrene com

C12H8S2

0,5
transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/Thianthrene_T_norm.dat organic compounds/Thianthrene_T_norm.JPG
thioctic acid
alpha-lipoic acid
com
C8H14O2S2
disulfide 0 R-S-S-R' transmission 2.4827 Sylvain Bohic Bohic et al., Anal Chem, 2008 Nov13 [Epub ahead of print] organic compounds/alpha-lipoic_acid_T_norm.dat organic compounds/alpha-lipoic_acid_T_norm.JPG

European Synchrotron Radiation Facility