Whole reconstruction

To run the whole volume reconstruction

Open an other xterm window (right button click and click on 'Xterm')

ganymedes:~ % ssh -X mdxxx@cronus1        (If cronus1 is down, use cronus2...)

cronus1% cd id19                                               (cd id19 for external, cd id19ext1 for external1 and cd id19ext2 for external2)

Submit the reconstruction file in executing:

To visualize:

The jobs in queue: cronus1% MONITOR_queue

The jobs running: cronus1% MONITOR_run

A run: cronus1% logview 211.PyHST.log

To cancel a job:

To cancel jobs under your name:

To cancel a subvolume only:

 
Your reconstructed volume can be huge.

A 2048x2048x2048 volume in float (4 bytes) format gives 8 files of 4 Gb each!!!

We so usually propose to reduce it in 1 byte (256 grey levels): mrecad procedure