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List of publications, thesis and reports resulting from experiments on beamline D2AM between 1995 and 1999

last modified 09-11-2007 11:55

1999:

H. J. Snijder, I. Ubarretxena-Belandia, M. Blaauw, K. H. Kalk, H. M. Verheij, M. R. Egmond, N. Dekker and B. W. Dijkstra "Structural evidence for dimerization-regulated activation of an integral membrane phospholipase" (1999) Nature 401 (6754): 717-21

L. Serre, A. Sailland, D. Sy, P. Boudec, A. Rolland, E. Pebay-Peyroula and C. Cohen-Addad "Crystal structure of Pseudomonas fluorescens 4-hydroxyphenylpyruvate dioxygenase: an enzyme involved in the tyrosine degradation pathway" (1999) Structure Fold Des 7 (8): 977-88

C. Sauter, B. Lorber, D. Kern, J. Cavarelli, D. Moras and R. Giege "Crystallogenesis studies on yeast aspartyl-tRNA synthetase: use of phase diagram to improve crystal quality" (1999) Acta Crystallogr D Biol Crystallogr 55 ( Pt 1): 149-56

A. Oubrie, H. J. Rozeboom, K. H. Kalk, A. J. Olsthoorn, J. A. Duine and B. W. Dijkstra "Structure and mechanism of soluble quinoprotein glucose dehydrogenase" (1999) Embo J 18 (19): 5187-94

S. Norager, P. Legrand, L. Pieulle, C. Hatchikian and M. Roth "Crystal structure of the oxidised and reduced acidic cytochrome c3from Desulfovibrio africanus" (1999) J Mol Biol 290 (4): 881-902

Y. Nicolet, C. Piras, P. Legrand, C. E. Hatchikian and J. C. Fontecilla-Camps "Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center" (1999) Structure Fold Des 7 (1): 13-23

E. Morgunova, A. Tuuttila, U. Bergmann, M. Isupov, Y. Lindqvist, G. Schneider and K. Tryggvason "Structure of human pro-matrix metalloproteinase-2: activation mechanism revealed" (1999) Science 284 (5420): 1667-70

S. Morera, A. Imberty, U. Aschke-Sonnenborn, W. Ruger and P. S. Freemont "T4 phage beta-glucosyltransferase: substrate binding and proposed catalytic mechanism" (1999) J Mol Biol 292 (3): 717-30

R. Morales, M. H. Charon, G. Hudry-Clergeon, Y. Petillot, S. Norager, M. Medina and M. Frey "Refined X-ray structures of the oxidized, at 1.3 A, and reduced, at 1.17 A, [2Fe-2S] ferredoxin from the cyanobacterium Anabaena PCC7119 show redox-linked conformational changes" (1999) Biochemistry 38 (48): 15764-73

J. Menetrey and J. Cherfils "Structure of the small G protein Rap2 in a non-catalytic complex with GTP" (1999) Proteins 37 (3): 465-73

P. Gouet, B. Fabry, V. Guillet, C. Birck, L. Mourey, D. Kahn and J. P. Samama "Structural transitions in the FixJ receiver domain" (1999) Structure Fold Des 7 (12): 1517-26

E. Garcin, X. Vernede, E. C. Hatchikian, A. Volbeda, M. Frey and J. C. Fontecilla-Camps "The crystal structure of a reduced [NiFeSe] hydrogenase provides an image of the activated catalytic center" (1999) Structure Fold Des 7 (5): 557-66

J.-L. Ferrer, J.-P. Simon, J.-F. Bérar, B. Caillot, E. Fanchon, O. Kaikati, S. Arnaud, M. Guidotti, M. Pirocchi and M. Roth, "D2AM, a beamline with a high intensity, point focusing, fixed-exit monochromator for multiwavelength anomalous diffraction experiments", (1998), Journal of Synchrotron Radiation, 5, 1346-1356.

J.-L. Ferrer, "Correction for the twist and the conical defects of a sagittaly bent crystal", Nucl. Instr. and Meth. in Phys. Res., Febr. 99

P. T. Erskine, R. Newbold, J. Roper, A. Coker, M. J. Warren, P. M. Shoolingin-Jordan, S. P. Wood and J. B. Cooper "The Schiff base complex of yeast 5-aminolaevulinic acid dehydratase with laevulinic acid" (1999) Protein Sci 8 (6): 1250-6

E. Ennifar, M. Yusupov, P. Walter, R. Marquet, B. Ehresmann, C. Ehresmann and P. Dumas "The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges" (1999) Structure Fold Des 7 (11): 1439-49

C. Charron, F. Talfournier, M. N. Isupov, G. Branlant, J. A. Littlechild, B. Vitoux and A. Aubry "Crystallization and preliminary X-ray diffraction studies of D-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Methanothermus fervidus" (1999) Acta Crystallogr D Biol Crystallogr 55 ( Pt 7): 1353-5

E. Chabriere, M. H. Charon, A. Volbeda, L. Pieulle, E. C. Hatchikian and J. C. Fontecilla-Camps "Crystal structures of the key anaerobic enzyme pyruvate:ferredoxin oxidoreductase, free and in complex with pyruvate" (1999) Nat Struct Biol 6 (2): 182-90

P. D. Carr, D. Verger, A. R. Ashton and D. L. Ollis "Chloroplast NADP-malate dehydrogenase: structural basis of light-dependent regulation of activity by thiol oxidation and reduction" (1999) Structure Fold Des 7 (4): 461-75

J. A. Bertrand, G. Auger, L. Martin, E. Fanchon, D. Blanot, D. Le Beller, J. Van Heijenoort and O. Dideberg "Determination of the MurD mechanism through crystallographic analysis of enzyme complexes" (1999) J Mol Biol 289 (3): 579-90

1998:

J. Sanz-Aparicio, J. A. Hermoso, M. Martinez-Ripoll, J. L. Lequerica and J. Polaina "Crystal structure of beta-glucosidase A from Bacillus polymyxa: insights into the catalytic activity in family 1 glycosyl hydrolases" (1998) J Mol Biol 275 (3): 491-502

M. Rousset, Y. Montet, B. Guigliarelli, N. Forget, M. Asso, P. Bertrand, J. C. Fontecilla-Camps and E. C. Hatchikian "[3Fe-4S] to [4Fe-4S] cluster conversion in Desulfovibrio fructosovorans [NiFe] hydrogenase by site-directed mutagenesis" (1998) Proc Natl Acad Sci U S A 95 (20): 11625-30

J.D. NG, B. Lorber, and R. Giégé, "Comparative analysis of Aspartyl tRNA-synthetase and Thaumatin crystals grown on earth and in microgravity', Life and Microgravity Spacelab Final Report, February 1998

J.D. NG, B. Lorber, and R. Giégé, "Comparative assessment of microgravity- and on earth-grown crystals Thaumatin and Aspartyl-tRNA synthetase", Second United States Microgravity Laboratory: One Year Report, Volume 2, August 1998

C. Mazza, R. Breton, D. Housset and J. C. Fontecilla-Camps "Unusual charge stabilization of NADP+ in 17beta-hydroxysteroid dehydrogenase" (1998) J Biol Chem 273 (14): 8145-52

J.-L. Ferrer, J.-P. Simon, J.-F. Bérar, B. Caillot, E. Fanchon, O. Kaikati, S. Arnaud, M. Guidotti, M. Pirocchi and M. Roth, "D2AM, a beamline with a high intensity, point focusing, fixed-exit monochromator for multiwavelength anomalous diffraction experiments", (1998), Journal of Synchrotron Radiation, 5, 1346-1356.

J. L. Ferrer, M. Roth and A. Antoniadis "Data compression for diffraction patterns" (1998) Acta Crystallogr D Biol Crystallogr 54 ( Pt 2): 184-99

A. Carfi, E. Duee, M. Galleni, J. M. Frere and O. Dideberg "1.85 A resolution structure of the zinc (II) beta-lactamase from Bacillus cereus" (1998) Acta Crystallogr D Biol Crystallogr 54 ( Pt 3): 313-23

P. Briozzo, B. Golinelli-Pimpaneau, A. M. Gilles, J. F. Gaucher, S. Burlacu-Miron, H. Sakamoto, J. Janin and O. Barzu "Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity" (1998) Structure 6 (12): 1517-27

C. Birck, O. Poch, C. Romier, M. Ruff, G. Mengus, A. C. Lavigne, I. Davidson and D. Moras "Human TAF(II)28 and TAF(II)18 interact through a histone fold encoded by atypical evolutionary conserved motifs also found in the SPT3 family" (1998) Cell 94 (2): 239-49

S. Arold, R. O'brien, P. Franken, M. P. Strub, F. Hoh, C. Dumas and J. E. Ladbury "RT loop flexibility enhances the specificity of Src family SH3 domains for HIV-1 Nef" (1998) Biochemistry 37 (42): 14683-91

1997:

J. D. Ng, B. Lorber, R. Giege, S. Koszelak, J. Day, A. Greenwood and A. Mcpherson "Comparative analysis of thaumatin crystals grown on earth and in microgravity" (1997) Acta Crystallogr D Biol Crystallogr 53 (6): 724-33

E. D. Lowe, M. E. Noble, V. T. Skamnaki, N. G. Oikonomakos, D. J. Owen and L. N. Johnson "The crystal structure of a phosphorylase kinase peptide substrate complex: kinase substrate recognition" (1997) Embo J 16 (22): 6646-58

D. Housset, G. Mazza, C. Gregoire, C. Piras, B. Malissen and J. C. Fontecilla-Camps "The three-dimensional structure of a T-cell antigen receptor V alpha V beta heterodimer reveals a novel arrangement of the V beta domain" (1997) Embo J 16 (14): 4205-16

J.-L. Ferrer, M. Roth and A. Antoniadis, "Data Compression for Diffraction Pattern

G. Boissy, S. Brunie, J. Bertrand, E. Fanchon, O. Dideberg, M. Roth and J.-L. Ferrer, "D2AM-Bio: Steps towards better protection of tobacco crops and new design of antibiotics", ESRF Newsletter 28 (April 1997) 18-20.

J. A. Bertrand, G. Auger, E. Fanchon, L. Martin, D. Blanot, J. Van Heijenoort and O. Dideberg "Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase from Escherichia coli" (1997) Embo J 16 (12): 3416-25

S. Arold, P. Franken, M. P. Strub, F. Hoh, S. Benichou, R. Benarous and C. Dumas "The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling" (1997) Structure 5 (10): 1361-72

1996:

R. Breton, D. Housset, C. Mazza and J. C. Fontecilla-Camps "The structure of a complex of human 17beta-hydroxysteroid dehydrogenase with estradiol and NADP+ identifies two principal targets for the design of inhibitors" (1996) Structure 4 (8): 905-15

G. Boissy, E. De La Fortelle, R. Kahn, J. C. Huet, G. Bricogne, J. C. Pernollet and S. Brunie "Crystal structure of a fungal elicitor secreted by Phytophthora cryptogea, a member of a novel class of plant necrotic proteins" (1996) Structure 4 (12): 1429-39

Steffi Arzt, Antonia Beteva, Florent Cipriani, Solange Delageniere, Franck Felisaz, Gabriele Forstner, Elspeth Gordon, Ludovic Launer, Bernard Lavault and Gordon Leonard "Automation of macromolecular crystallography beamlines" Progress in Biophysics and Molecular Biology In Press, Corrected Proof:

J-L. Ferrer, J. Hischler, M. Roth, J. C. Fontecilla-Camp, "Mosaic spread measurements of space-grown and earth-grown protein crystals", ESRF Newsletter (1996) p27, p28, p29.

1995:


E. Fanchon, J.-L. Ferrer, R. Kahn, C. Berthet, M. Roth, "Protein crystallography: easy MAD on D2AM", ESRF Newsletter 24 (june 1995) 6-7.

J.-L. Ferrer, M. Roth, E. Fanchon, G. Poupon, M.-C. Saint-Lager, J.-F. Berar, "Thermal bilayer monochromator crystal for a high resolution multiwavelength anomalous diffraction beamline at the European Synchrotron Radiation Facility", Review of Scientific Instruments (1995), 2089-2091:

1992:


M. Roth, J.-L. Ferrer, J.-P. Simon, E. Geissler, "Design of mirror and monochromator crystals for a high-resolution multiwavelength anomalous diffraction beam line on a bending magnet at the ESRF", Rev. Sci. Instrum. 63 1 (1992), 1043-1046.


Thesis

  • Catherine Mazza,"17b-hydroxystéroide déshydrogénase humaine de type I: analyse des relations Structure-Fonction par Mutagénèse Dirigée et Cristallographie des Rayons X", Université Joseph Fourier-Grenoble I, 31 oct. 97
  • Elsa Garcin, "Etudes cristallographiques du site actif des hydrogénases à nickel de Desulfovibrio gigas et Desulfomicrobium baculatum", Université Joseph Fourier-Grenoble I, juin 98
  • Stefan Arold, "Etude structurale et thermodynamique de l'interaction da la protéine Nef du virus VIH avec les domaines SH3 de protéine-tyrosines kinases de la famille Src" Université Montpellier I, 29 juin 1998>
  • Louis Renault, "Structure tridimensionnelle de RCC1 le régulateur de la condensation chromosomique par cristallographie aux rayons X", Université Joseph Fourier-Grenoble I, 24 juillet 1998
  • Sofie Charlotte Norager, "Etude cristallographique des deux cytochromes C3 tétrahémiques de Desulfovibrio africanus", Université Joseph Fourier-Grenoble I, 25 sept. 98
  • Yael Montet, Université Joseph Fourier-Grenoble I, 30 oct. 98
  • Andrea Carfi, "Analyse structurale des b-lactamases a Zinc, Université Joseph Fourier-Grenoble I,
  • Germaine Sainz, "Caracterisation et études structurales de l'ornithine carbamoyltransférase catabolique de P.aeruginosa", Université Joseph Fourier-Grenoble I, 26 juin 1998
  • Magali Faure, "Etude biologique et structurale des protéines du complexe de la glycine décarboxylase", Université Joseph Fourier-Grenoble I, 23 mars 99
  • Nicolas Mouz, "Etude des relations structure-fonction de la Penicillin-Binding Protein 2x de streptococcus pneumoniae", Université Joseph Fourier-Grenoble I, 2 juillet 99

Reports


Experiment reports

consultation of ESRF reports (up to now CRG reports are not available).
 
European Synchrotron Radiation Facility